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Poster Numbers
| Poster Number | Postertitle | Firstname | Lastname |
|---|---|---|---|
| P01 | A simple and flexible computational framework for inferring sources of heterogeneity from single-cell dynamics | Lekshmi | Dharmarajan |
| P02 | Deciphering the role of Nrf2-related glutathione pathways in malignant cancer cells | Agathe | Morand |
| P03 | Realizing Waddington's metaphor: Inferring regulatory landscapes from single-cell gene expression data | Jeremie | Breda |
| P04 | MDR to preXDR to XDR tuberculosis: whole genome sequencing reveals several different evolutionary strategies | Serej | Ley |
| P05 | Representation learning of disease associated cell subsets from single-cell RNA sequencing data | Nicolas | Ochsner |
| P06 | HABP4 is required for colon tumorigenesis in the murine colitis-associated carcinoma model | Talita Diniz Melo | Hanchuk |
| P07 | The challenges of annotation and integration of scRNA-Seq into Bgee | Sara | Fonseca Costa |
| P08 | Discovery of potent anthranilic acid derivatives for the treatment of chronic inflammation | Madhwi | Ojha |
| P09 | An alignment-free method for predicting phenotypes of sequenced bacterial isolates | Maido | Remm |
| P10 | Gut microbiota, neuropsychometric test scores and neuroimaging differentiate cognitive impairment in Parkinson's disease | Suleyman | Yildirim |
| P11 | Leveraging correlated risks to increase power in Genome-Wide Association Studies | Ninon | Mounier |
| P12 | Non-parametric modeling of state shifts in microbial communities | Ville | Laitinen |
| P13 | Insights into lung microbiome dysbiosis in patients with active pulmonary tuberculosis: a nested case-control study | Monica R. | Ticlla |
| P14 | Codon bias in lincRNAs: a mechanism to prevent translation? | Anneke | Brümmer |
| P15 | Tracking bacterial pathogens in the regime of fast horizontal gene transfer | Nicholas | Noll |
| P16 | Deep motif deconvolution of HLA-II peptidomes for robust class II epitope predictions | Julien | Racle |
| P17 | Condition-specific series of metabolic sub-networks and its application for gene set enrichment analysis | Van Du T. | Tran |
| P18 | Characterisation of wild-type Von Hippel-Lindau ccRCC with the application of both a bottom-up and a top-down multi-omic integrative approach | Aashil A | Batavia |
| P19 | PCTAIRE1 kinase overcomes PolST induced mitotic arrest and cell death | Qaaifah | Gillani |
| P20 | Cracking the HCC code - a multi-OMICS study of liver cancer to understand its development and therapy response | Eva | Dazert |
| P21 | shortRNA: a flexible framework for the analysis of short RNA sequencing data | Deepak K | Tanwar |
| P22 | Explore a new ligand binding site of G protein-coupled receptors | Shuguang | Yuan |
| P23 | A national infrastructure network to enable secure biomedical data processing: the BioMedIT project | Martin | Fox |
| P24 | A bioinformatic workflow to enable species assignment directly from metagenetic sequencing | Tsering | Wüthrich |
| P25 | SwissTargetPrediction: web tool update and large-scale evaluation of protein target prediction for bioactive small molecules | Antoine | Daina |
| P26 | LEMMI: a live evaluation of computational methods for metagenome investigation | Mathieu | Seppey |
| P27 | Microbial population in fluctuating environments, how the size influences the strategy | Athos | Fiori |
| P28 | Molecular and functional characterization of papillary renal cell carcinoma | Silvia | Angori |
| P29 | Characterization of kinase activities inferred by phosphoproteomics in myeloid cell lines treated with targeting compounds for the identification of driving and bypassing oncogenic signaling pathways | Mahmoud | Hallal |
| P30 | Loss of hexokinase 2 causes insulin resistance | Mitsugu | Shimobayashi |
| P31 | Arsenic disturbs the gut microbiome of a disadvantaged community in Nepal | Samendra | Sherchan |
| P32 | Are metagenomic data sufficiently informative to robustly predict inflammatory bowel disease status? | Lusine | Khachatryan |
| P33 | Cluster partitions and fitness landscapes of the Drosophila fly microbiome | Lisa | Lamberti |
| P34 | Copy number phylogenetics for single cells | Mustafa Anil | Tuncel |
| P35 | A single cell lineage tree reconstruction algorithm based on an adjusted Steiner tree approximation algorithm | Mohammad Hadi | Foroughmand Araabi |
| P36 | Machine learning-aided single-cell transcriptomics of HAdV-infected cells | Anthony | Petkidis |
| P37 | Bayesian nonparametric clustering of single-cell mutational profiles | Nico | Borgsmüller |
| P38 | A probabilistic model for clustering scRNAseq data | Pascal | Grobecker |
| P39 | Multi-omics analysis in real time using SCfind | Jimmy Tsz Hang | Lee |
| P40 | Combined unsupervised clustering and anomaly detection to identify disease associated rare cell populations | Madeleine | Suffiotti |
| P41 | A network-based approach for visualization and simplification of single-cell RNA sequencing data | Mariia O. | Bilous |
| P42 | rCASC: reproducible classification analysis of single cell sequencing data | Raffaele | Calogero |
| P43 | Single-cell transcriptomics in unravelling the cellular diversity and molecular signature that govern anti-tumour functions of myeloid cells in vivo | Marta | Bica |
| P44 | Variations on a single-cell RNAseq pipeline: benchmarks from filtering to clustering | Pierre-Luc | Germain |
| P45 | Benchmarking confounder removal tools for scRNA-Seq data | Ruben | Chazarra - Gil |
| P46 | Effect of rabies virus infection on expression levels of Parvalbumin and secretagogin genes in the brains of rabies infected mice | Brenda | Kanu |
| P47 | Effect of rabies virus infection on the expression levels of calbindin D28k and calretinin in mouse brain | George Chibuike | Korie |
| P48 | Insilico profiling and structural insights to understand impact of SNPs in pfact transporter protein by MD simulation approach | Rahila | Sardar |
| P49 | Investigation of HIV transmission dynamics among young women engaged in sex work in Mombasa, Kenya | Michael | Becker |
| P50 | Novel Rhabdovirus and an almost complete drain fly transcriptome recovered from two independent contaminations in clinical metagenomic samples | Francisco | Brito |
| P51 | Non-invasive monitoring of drug action: exploring new assay designs for Chagas' disease in vitro drug discovery | Anna Frieda | Fesser |
| P52 | Predicting tumour evolution using cancer progression models | Ramon | Diaz-Uriarte |
| P53 | Genetic simulation with frequency-dependent fitness to examine the role of genetic constraints, mutator genes, and population size on cancer cooperation and competition and their effects on tumour progression | Ramon | Diaz-Uriarte |
| P54 | A diversity study of the Epstein-Barr Virus (EBV) in HIV-infected patients | Alexis | Loetscher |
| P55 | Discovery of a newly evolved pneumococcal Serotype 6F in Switzerland | Oluwaseun | Oyewole |
| P56 | Building an automated continuous culture device to study drug resistance evolution in bacteria | Eric | Ulrich |
| P57 | Static stretch affects the pro- inflammatory response of type II alveolar epithelial cells | Jorge Miguel | Ferreira |
| P58 | Circulating miR-1246 in the progression of chronic obstructive pulmonary disease (COPD) in patients from the BODE cohort | Sara Estefania | Cazorla-Rivero |
| P59 | Trifostigmanoside I, an active constituent from sweet potato, restores the function of MUC-2 and tight junctions through PKC & | Amna | Parveen |
| P60 | Role of NLRP3 inflammasome in sterile cardiovascular disease | Fumitake | Kawanishi |
| P61 | Integrating variant frequencies in neXtProt for a better representation of the human proteome | Alain | Gateau |
| P62 | Genetic diversity of Mycobacterium tuberculosis from extensively drug-resistant patients from Georgia | Tatjana | Meyer |
| P63 | Transcriptome analysis describing immunity and metabolism genes in peripheral blood mononuclear cells of cervical cancer patients to Senegal | Moussa | Ndiaye |
| P64 | Identifying genetic modifiers of prion disease | Jiang-An | Yin |
| P65 | An enhanced workflow for variant interpretation in UniProtKB/Swiss-Prot improves consistency and reuse in ClinVar | Anne | Estreicher |
| P66 | CD34+ cells in liver with myogenic potential | Bipasha | Bose |
| P67 | Possible therapeutic roles of diet-regulated gene expressions during brain aging using zebrafish | Begün | Erbaba |
| P68 | A novel approach in stem cell therapy for alzheimer's animal model | Mehdi | Mehdizadeh |
| P69 | Development of the multiscale model of germinal center B cell differentiation | Bhavesh | Soni |
| P70 | Suppression of 1-deoxydihydroceramide production protects against protein aggregation and anoxia injury | J. Thomas | Hannich |
| P71 | A service for the automated creation of genome-scale metabolic network model from a microbial genome | Sébastien | Moretti |
| P72 | BioModels parameters: a resource to search and access parameters from published systems models | Rahuman S | Malik Sheriff |
| P73 | An in-silico approach to explore the evolutionary signatures of host pathogen interactions | Aranyak | Goswami |
| P74 | Major improvements in the reconciliation of metabolites and biochemical reactions to ease metabolic network reconstruction | Sébastien | Moretti |
| P75 | Discovery, estimation and prediction analysis using a Bayesian survival model for complex diseases | Sven Erik | Ojavee |
| P76 | In silico approach of jack bean as DPP1V inhibitory activity | Andriati | Ningrum |
| P77 | In silico approach of collagen from tuna fish by-product as ACE inhibitor | Andriati | Ningrum |
| P78 | Diagnostics and correction of batch effects in large-scale proteomics studies | Chloe H. | Lee |
| P79 | Homopolymers in Mycobacterium tuberculosis: a source for rapid adaptation? | Michaela | Zwyer |
| P80 | Assessing cancer heterogeneity among cancer types | Paula | Carrio Cordo |
| P81 | Facilitating collection of literature for personalized cancer treatments | Emilie | Pasche |
| P82 | Identification of potential inhibitors targeting cholinesterase: an in silico and in vitro approach | Manish Kumar | Tripathi |
| P83 | Unconventional cell cycle modeling: a vision from third angle | Mustafa | Pasha |
| P84 | A machine learning based algorithm for deciphering complex chemical structures of secondary metabolites by genome mining | Priyesh Prateek | Agrawal |
| P85 | Hierarchical ensemble methods for ontology-based predictions in computational biology and precision medicine | Marco | Notaro |
| P86 | A pipeline for characterization of possible ncRNA homologs in BLAST output | Marek | Schwarz |
| P87 | Haplotype based expression quantitative Trait Loci mapping | Robin | Hofmeister |
| P88 | Molecular basis of gene regulatory variation in human adipose stromal cells | Daniel | Alpern |
| P89 | Protein-wide simulations to drive the design of new therapies from multi-omics data | Attila | Csikász-Nagy |
| P90 | Integrating expression data into metabolome-wide GWAS identifies genes involved in the modulation of the metabolite concentration | Reyhan | Sonmez Flitman |
| P91 | Remote and local services to search and visualize reactions and metabolites from the Rhea databases | Parit | Bansal |
| P92 | Identifying a good animal model for age-related muscle loss in humans | Anastasiya | Börsch |
| P93 | Cancer cell lines in focus: somatic copy number variation and germline variation | Qingyao | Huang |
| P94 | Rhea, an expert curated resource of biochemical reactions with SPARQL endpoint | Alan | Bridge |
| P95 | Representing the human metabolome in UniProtKB using Rhea | Lionel | Breuza |
| P96 | A novel MASP1 gene mutation causes 3MC1 syndrome in the first reported Egyptian family | AmiraA Nabil | Khalaf |
| P97 | Transcriptional regulators which are induced in HCC affect deregulation of central catabolism | Sujin | Park |
| P98 | Role of mTOR in regulating DLK1-DIO3 cluster miRNAs | Dritan | Liko |
| P99 | ER and mitochondrial stress in liver cancer cells | Amandine | Thomas |
| P100 | Conditional estimation of the contribution of genomic regions and functional annotations to common complex disease | Marion | Patxot |
| P101 | An evolutionarily conserved mechanism of translation regulation by TORC1 | Sunil | Shetty |
| P102 | Interactome profiling of mTOR signalling | Wenxiang | Fu |
| P103 | Role of the transcription factor TCF3 in HCC progression | Stefania | Battaglioni |
| P104 | CRUNCH: completely automated analysis of ChIP-seq data | Mikhail | Pachkov |
| P105 | Deciphering the landscape of phosphorylated HLA-I ligands | Marthe | Solleder |
| P106 | Inferring RNA-binding sites, motifs and regulation from CLIP data with RCRUNCH | Maria | Katsantoni |
| P107 | PolyASite 2.0: a comprehensive atlas of RNA 3' ends | Christina Janina | Herrmann |
| P108 | ViraMiner: deep learning for identifying viral genomes in human samples | Zurab | Bzhalava |
| P109 | Crunch-mara: modeling gene regulation on DNA Level | Anne | Krämer |
| P110 | Protein histidine phosphorylation - a novel target in cancer therapy? | Markus | Linder |
| P111 | A deep learning framework to score cancer cell proliferation and oncolytic virus efficacy in 3D tumor models | Fanny | Georgi |
| P112 | sparql.uniprot.org: moving past search for research | Jerven | Bolleman |
| P113 | Bionotator and NRPro: bioinformatics tools for the study of nonribosomal peptides | Emma | Ricart Altimiras |
| P114 | ReSequenceR: simulating more realistic high-throughput sequencing data | Stephan | Schmeing |
| P115 | UniLectin, a knowledge-base of carbohydrate-binding proteins | François | Bonnardel |
| P116 | Swiss-PO. A new web tool to help predicting mutation pathogenicity for precision oncology | Fanny | Krebs |
| P117 | Supporting structure prediction method development with continuous automated model eEvaluatiOn (CAMEO) | Juergen | Haas |
| P118 | Studies on the interaction of rotavirus non-structural proteins NSP5, NSP2 with host cellular factors and their role in virus replication | Varsha | Tandra |
| P119 | Minimisation of surface energy drives apical epithelial organisation and gives rise to Lewis' law | Marco | Kokic |
| P120 | & | Soumik | Ray |
| P121 | & | Don | Benjamin |
| P122 | Kinetic analysis of the minimal model to describe metabolic oscillations in Bacillus subtilis biofilms | Ravindra | Garde |
| P123 | Optimised nitrogen fixing bacteria: a whole cell modelling approach | Leanne | Massie |
| P124 | Biomedical big data analysis and management on secure research platforms | Michal | Okoniewski |
| P125 | Design and development of potential acetylcholinesterase and BACE-1 inhibitors for the treatment of Alzheimer's disease | Avanish | Tripathi |
| P126 | HLA-I 9-mer peptides exhibit a preference for helical topologies in the source proteins1 | Marta A. S. | Perez |
| P127 | SWISS-MODEL: homology modelling of protein structures and complexes | Gerardo | Tauriello |
| P128 | Minimum error calibration and normalization for copy number analysis | Bo | Gao |
| P129 | User experience (UX) at the SIB swiss institute of bioinformatics | Chiara | Gabella |
| P130 | Kinetic properties of rhodanese from African locust bean seeds (Parkia biglobosa) | Leonard | Ehigie |
| P131 | Genome-wide association study in Japanese cohort identifies variants near amylase genes associated with serum amylase level | Zannatun | Nayema |
| P132 | Computational exploration to design and synthesise N-benzylpiperidines as multifunctional therapeutics to treat Alzheimer's disease | Piyoosh | Sharma |
| P133 | Complete genome sequencing and molecular characterization of a rabies virus isolated from trade dogs in Plateau State, Nigeria | Grace | Kia |
| P134 | Krini: data analysis in the cloud | Alexander | Kanitz |
| P135 | Fruit of Lycium barbarum displays neurotrophic, neuritogeneis and anti-neuroinflammatory activities In-vitro | Zahra | Khan |
| P136 | SWITCH edu-ID based login into SSH servers | Heinz | Stockinger |
| P137 | Sodium fluoride induced skeletal muscle changes: muscle hypertrophy versus muscle atrophy and signaling mechanisms | Sudheer | Shenoy P |
| P138 | Searching for robust Turing patterns using discrete models | Thomas | Leyshon |
| P139 | Identification of novel microbial P450s as drug-metabolizing enzymes | Lisa Marie | Schmitz |
| P140 | Nrf2/KEAP1 reporter human 3D epidermal model | Bruno Guy Henri | Filippi |
| P141 | In-silico protein-wide models predicts effect of Metformin in murine liver cells | Simone | Rizzetto |
| P142 | Lamin A/C promotes DNA base excision repair | Scott | Maynard |
| P143 | Nsun5 in ribosome function and mammalian healthy lifespan | Lisa | Liendl |
| P144 | Discovery of MYST1 small-molecule inhibitors as epigenetic tools of gene regulation | Anastasiia | Gryniukova |
| P145 | Development of a ROR& | Huiping | Huang |
| P146 | XFEL-based serial femtosecond crystallography in drug discovery | Alexey | Mishin |
| P147 | From a new premature aging disorder towards aging mechanisms | Daniela | Bakula |
| P149 | Leveraging NAD+ signalling as a treatment pathway for age-related metabolic dysfunction | Brenna | Osborne |
| P150 | Targeting aging with deep learned drugs | Garik | Mkrtchyan |
| P151 | The Dlk1-Dio3 miRNA cluster plays a crucial role in skeletal muscle aging by targeting Smad4 | KI-SUN | Kwon |
| P152 | Text mining pathology reports and machine learning for aging knowledge discovery | Michael | Ben Ezra |
| P153 | An effort to build an in vitro high-throughput screening for seizure liability based on calcium oscillation of human iPS-derived dopaminergic neurons with astrocyte | Sunao | Hisada |
| P154 | Engineer the DNA damage that drives senescence | Guido | Keijzers |
| P155 | Recombinant expression and assay development for Ghrelin O-acyltransferase (GOAT) to support a hit discovery program based on high-throughput screening | Huiping | Huang |
| P156 | Neuropathological changes in the PDAPP transgenic mouse model of Alzheimer disease | Hamed | Omidi |
| P157 | A chemical language based approach for the prediction of protein - ligand binding affinity | Elif | Ozkirimli |
| P158 | CNOT6 affects genome stability by regulating mismatch repair | Peng | Song |
| P159 | Pharmacokinetic parameters may vary in different mice strains after a single dose of drugs | Yuliia | Holota |
| P160 | Deciphering the interplay between hypoxia and DNA metabolism in aging | Amanuel | Teklu |
| P161 | Ketogenic diet to delay brain aging in Cockayne syndrome | Tulika | Tulika |
| P162 | Glycation extent of hemoglobin (HbA1c) might reflect biological age | Urs | Nydegger |
| P163 | Deep learning of histopathology to understand age-related disease | Indra | Heckenbach |
| P164 | Modelling the collective migration of neural crest cells with multi-agent reinforcement learning | Koki | Shimada |
| P165 | Investigating treatment response of patients with confirmed drug-resistant tuberculosis in an HIV-1-endemic population in Western Kenya | Clement | Shiluli |
| P166 | The impact of Fluoroquinolone-resistance mutations on the rates of further drug-resistance acquisition in Mycobacterium tuberculosis | Rhastin A. D. | Castro |
| P167 | Flow induced dispersion analysis (FIDA) for size-based characterization of proteins and protein interactions under native conditions | Morten | E. Pedersen |
| P168 | A novel tool for the treatment of peripheral demyelinating neuropathies | Anna | Henzi |
| P169 | Rational design of neuroprotective antibodies against the prion protein by phage display | Assunta | Senatore |
| P170 | The smart DNA-based biosensor as a new method for mRNA in vitro detection | Ekaterina A | Bryushkova |
| P172 | Construction of a multiplexed CRISPRi knockdown library in mycobacteria | Kristin | Winkler |
| P173 | Use of a human urothelial organoid model for pre-clinical validation of novel ultrasound-activated microbubbles in the treatment of chronic urinary tract infection | Harry | Horsley |
| P174 | High throughput discovery of novel peptides with biological function | Francesca | Billwiller |
| P175 | First report of novel unimolecular amylin-adrenomedullin dual agonists | Lisbeth | Elster |
| P176 | Negative-regulation of gastric proton pump by N-terminal polypeptide of Sonic Hedgehog | Takuto | Fujii |
| P177 | Total synthesis of Cochinmicin I and its role as potent cyclodepsipeptide endothelin antagonist | Romina | Schnegotzki |
| P178 | Towards the development of inhibitors targeting CtIP function in DNA repair | Nour Lydia | Mozaffari |
| P179 | Phototoxicity in live cell imaging: the evil within | Hugo | Moreno |
| P180 | The pro-inflammatory mediators adenosine and hyaluronan modulate lung fibrosis and pulmonary hypertension in Combined Pulmonary Fibrosis and Emphysema (CPFE) | Harry | Karmouty-Quintana |
| P181 | investigating the prevalence of anaemia in rural gambia, in relation to levels of zinc protoporphyrin, haemoglobin and haptoglobin (phenotype and genotype) | Ebrima | Bah |
| P182 | HumanGEM: the generic genome-scale metabolic model of Homo sapiens | Hao | Wang |
| P183 | Structure-function relationships of high-density lipoprotein in type 2 diabetes and coronary heart disease | Mathias | Cardner |
| P184 | Cysteine oxidation triggers phase separation of the tumour suppressor p16INK4A | Loes | van Dam |
| P185 | Epigenetic modification associated with type II interferon gamma in challenge virus standard (CVS) strain and Nigerian street rabies virus (SRV) infected mice | Maryam | Abdulazeez |
| P186 | Analysis of DNA methylation patterns and epigenetic drug response of acute myeloid leukemia | Ralitsa | Langova |
| P187 | Human broncho-alveolar epithelial cells from normal and diseased lungs maintain progenitor status and form organoids. | Harry | Karmouty Quintana |